Transcript: USP2-AS1:6

Basic information

LNCipedia transcript ID: USP2-AS1:6 
LNCipedia gene ID: USP2-AS1
Location (hg38): chr11:119381805-119409489
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 284 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT024661
Alternative gene names: THY1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.4079 non-coding 
CPAT coding probability 13.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP2-AS1:6 no no no no

Available literature

  1. Hart (2014), MYC regulates the non-coding transcriptome., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-305N23.1.1-1:9
4.0 USP2-AS1:6
4.1 USP2-AS1:6
5.0 USP2-AS1:6
5.1 USP2-AS1:6
5.2 USP2-AS1:6