Transcript: LINC01537:1

Basic information

LNCipedia transcript ID: LINC01537:1 
LNCipedia gene ID: LINC01537
RefSeq ID: NR_126364
Location (hg38): chr11:72570656-72573222
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2447 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126364; NR_126364.1
Alternative gene names: RP11-169D4.1-001; LINC01537


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.4193 non-coding 
CPAT coding probability 18.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01537:1 no no no no

Available literature

  1. Shen (2014), Long non-coding RNA profiling in laryngeal squamous cell carcinoma and its clinical significance: potential biomarkers for LSCC., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATG16L2-6:2
4.0 LINC01537:1
4.1 LINC01537:1
5.0 LINC01537:1
5.1 LINC01537:1
5.2 LINC01537:1