Transcript: LINC01531:1

Basic information

LNCipedia transcript ID: LINC01531:1 
HGNC Gene Symbol: LINC01531    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1531
Ensembl Gene ID: ENSG00000205786
Ensembl Transcript ID: ENST00000602468
Location (hg38): chr19:35399511-35409600
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 728 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065831; ENST00000602468.1; ENST00000602468.5
Alternative gene names: ENSG00000205786.4; AC002511.1; ENSG00000205786.8; LINC01531;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.6456 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01531:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR42-1:2
4.0 LINC01531:1
4.1 LINC01531:1
5.0 LINC01531:1
5.1 LINC01531:1
5.2 LINC01531:1