Transcript: LINC01521:2

Basic information

LNCipedia transcript ID: LINC01521:2 
HGNC Gene Symbol: LINC01521    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1521
Ensembl Gene ID: ENSG00000213888
Ensembl Transcript ID: ENST00000504184
Location (hg38): chr22:31346777-31348719
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1943 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000504184.3
Alternative gene names: ENSG00000213888.3; LINC01521;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.3973 non-coding 
CPAT coding probability 75.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01521:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01521:2
4.1 LINC01521:2
5.0 LINC01521:2
5.1 LINC01521:2
5.2 LINC01521:2