Transcript: LINC01299:1

Basic information

LNCipedia transcript ID: LINC01299:1 
HGNC Gene Symbol: LINC01299    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1299
Ensembl Gene ID: ENSG00000254081
Ensembl Transcript ID: ENST00000520902
Location (hg38): chr8:65527008-65562780
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2634 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000520902.1; CTD-3025N20.2-001; OTTHUMT00000378479.1; NONHSAT126986
Alternative gene names: ENSG00000254081.1; CTD-3025N20.2; OTTHUMG00000164373.1; LINC01299;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.8012 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01299:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARMC1-1:1
4.0 LINC01299:1
4.1 LINC01299:1
5.0 LINC01299:1
5.1 LINC01299:1
5.2 LINC01299:1