Transcript: LINC01100:2

Basic information

LNCipedia transcript ID: LINC01100:2 
LNCipedia gene ID: LINC01100
RefSeq ID: NR_104132
Location (hg38): chr3:160020649-160031423
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 618 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104132; NR_104132.1
Alternative gene names: ; LINC01100


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.2831 non-coding 
CPAT coding probability 5.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01100:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2049J23.3.1-1:1
4.0 LINC01100:2
4.1 LINC01100:2
5.0 LINC01100:2
5.1 LINC01100:2
5.2 LINC01100:2