Transcript: LINC01054:2

Basic information

LNCipedia transcript ID: LINC01054:2 
LNCipedia gene ID: LINC01054
RefSeq ID: NR_126391
Location (hg38): chr13:114329757-114333948
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 316 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126391; NR_126391.1
Alternative gene names: ; LINC01054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.5157 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01054:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASA3-1:2
4.0 LINC01054:2
4.1 LINC01054:2
5.0 LINC01054:2
5.1 LINC01054:2
5.2 LINC01054:2