Transcript: LINC00955:1

Basic information

LNCipedia transcript ID: LINC00955:1 
LNCipedia gene ID: LINC00955
Location (hg38): chr4:3576869-3590439
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1937 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00007378
Alternative gene names: XLOC_003428; linc-ADRA2C-4; FLJ35424


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.4532 non-coding 
CPAT coding probability 37.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00955:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP3-368B9.1.1-1:1
3.1 lnc-RP3-368B9.1.1-1:1
4.0 LINC00955:1
4.1 LINC00955:1
5.0 LINC00955:1
5.1 LINC00955:1
5.2 LINC00955:1