Transcript: LINC00898:3

Basic information

LNCipedia transcript ID: LINC00898:3 
HGNC Gene Symbol: LINC00898    
HGNC Full Gene Name: long intergenic non-protein coding RNA 898
Ensembl Gene ID: ENSG00000205634
Ensembl Transcript ID: ENST00000610069
Location (hg38): chr22:47625235-47629902
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1114 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610069.1
Alternative gene names: ENSG00000205634.2; LINC00898; ENSG00000205634.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.9387 non-coding 
CPAT coding probability 38.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00898:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LL22NC03-75H12.2.1-2:2
4.0 LINC00898:3
4.1 LINC00898:3
5.0 LINC00898:3
5.1 LINC00898:3
5.2 LINC00898:3