Transcript: LINC00637:1

Basic information

LNCipedia transcript ID: LINC00637:1 
HGNC Gene Symbol: LINC00637    
HGNC Full Gene Name: long intergenic non-protein coding RNA 637
Ensembl Gene ID: ENSG00000258735
Ensembl Transcript ID: ENST00000556586
RefSeq ID: NR_038436
Location (hg38): chr14:103847721-103858049
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2056 bp
Exons: 3
Sources: Broad Institute; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00022360; NR_038436; ENST00000556586.1; NR_038436.1
Alternative gene names: XLOC_010944; linc-TDRD9-3; ENSG00000258735.1; LINC00637;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.8247 non-coding 
CPAT coding probability 15.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00637:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2134A5.2.1-1:1
3.1 lnc-CTD-2134A5.2.1-1:1
4.0 LINC00637:1
4.1 LINC00637:1
5.0 LINC00637:1
5.1 LINC00637:1
5.2 LINC00637:1