Transcript: LINC00636:1

Basic information

LNCipedia transcript ID: LINC00636:1 
LNCipedia gene ID: LINC00636
Location (hg38): chr3:107883205-107928906
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1306 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT091073; NR_015394
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.9073 non-coding 
CPAT coding probability 31.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00636:1 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-631B21.2.1-1:1
4.0 LINC00636:1
4.1 LINC00636:1
5.0 LINC00636:1
5.1 LINC00636:1
5.2 LINC00636:1