Transcript: LINC00544:5

Basic information

LNCipedia transcript ID: LINC00544:5 
LNCipedia gene ID: LINC00544
Location (hg38): chr13:29937924-29950453
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 392 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000380640.2
Alternative gene names: ENSG00000122043.6; LINC00544;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.9933 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00544:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-90M5.1.1-1:5
4.0 LINC00544:5
4.1 LINC00544:5
5.0 LINC00544:5
5.1 LINC00544:5
5.2 LINC00544:5