Transcript: LINC00346:1

Basic information

LNCipedia transcript ID: LINC00346:1 
LNCipedia gene ID: LINC00346
Location (hg38): chr13:110863496-110870582
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6969 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022115; NONHSAT035181
Alternative gene names: XLOC_010723; linc-CARS2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.6553 non-coding 
CPAT coding probability 79.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00346:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LINC00346-1:1
3.1 lnc-LINC00346-1:1
4.0 LINC00346:1
4.1 LINC00346:1
5.0 LINC00346:1
5.1 LINC00346:1
5.2 LINC00346:1