Transcript: LACTB2-AS1:5

Basic information

LNCipedia transcript ID: LACTB2-AS1:5 
HGNC Gene Symbol: LACTB2-AS1    
HGNC Full Gene Name: LACTB2 antisense RNA 1
Ensembl Gene ID: ENSG00000246366
Ensembl Transcript ID: ENST00000518152
Location (hg38): chr8:70608682-70646490
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 784 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT127170; ENST00000518152.1
Alternative gene names: ENSG00000246366.6; LACTB2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.038 non-coding 
CPAT coding probability 24.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LACTB2-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC120194.1-2:4
4.0 LACTB2-AS1:5
4.1 LACTB2-AS1:5
5.0 LACTB2-AS1:5
5.1 LACTB2-AS1:5
5.2 LACTB2-AS1:5