Transcript: LACTB2-AS1:3

Basic information

LNCipedia transcript ID: LACTB2-AS1:3 
HGNC Gene Symbol: LACTB2-AS1    
HGNC Full Gene Name: LACTB2 antisense RNA 1
Ensembl Gene ID: ENSG00000246366
Ensembl Transcript ID: ENST00000519358
Location (hg38): chr8:70608592-70632796
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT127168; ENST00000519358.5
Alternative gene names: ENSG00000246366.6; LACTB2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8204 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LACTB2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC120194.1-2:2
4.0 LACTB2-AS1:3
4.1 LACTB2-AS1:3
5.0 LACTB2-AS1:3
5.1 LACTB2-AS1:3
5.2 LACTB2-AS1:3