Transcript: GSN-AS1:1

Basic information

LNCipedia transcript ID: GSN-AS1:1 
HGNC Gene Symbol: GSN-AS1    
HGNC Full Gene Name: GSN antisense RNA 1
Ensembl Gene ID: ENSG00000235865
Ensembl Transcript ID: ENST00000414544
RefSeq ID: NR_103560
Location (hg38): chr9:121280768-121285530
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4763 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000414544.1; GSN-AS1-001; OTTHUMT00000053874.1; NONHSAT134546; NR_103560; NR_103560.1
Alternative gene names: ENSG00000235865.2; GSN-AS1; OTTHUMG00000020586.1; MOST2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.9594 non-coding 
CPAT coding probability 46.15% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GSN-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STOM-2:1
4.0 GSN-AS1:1
4.1 GSN-AS1:1
5.0 GSN-AS1:1
5.1 GSN-AS1:1
5.2 GSN-AS1:1