Transcript: FAM27E5:4

Basic information

LNCipedia transcript ID: FAM27E5:4 
HGNC Gene Symbol: FAM27E5    
HGNC Full Gene Name: family with sequence similarity E5
Ensembl Gene ID: ENSG00000178130
Ensembl Transcript ID: ENST00000613377
Location (hg38): chr17:22299375-22299694
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 216 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000613377.1
Alternative gene names: ENSG00000178130.9; FAM27L; MGC35151; FAM27E5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.4239 non-coding 
CPAT coding probability 2.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM27E5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FAM27E5:4
4.1 FAM27E5:4
5.0 FAM27E5:4
5.1 FAM27E5:4
5.2 FAM27E5:4