Transcript: FAM27E5:2

Basic information

LNCipedia transcript ID: FAM27E5:2 
LNCipedia gene ID: FAM27E5
Location (hg38): chr17:22298764-22299892
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025102
Alternative gene names: XLOC_012148; linc-MTRNR2L1-1; MGC35151


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.4786 non-coding 
CPAT coding probability 19.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM27E5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM27L-1:1
3.1 lnc-FAM27L-1:2
4.0 FAM27E5:2
4.1 FAM27E5:2
5.0 FAM27E5:2
5.1 FAM27E5:2
5.2 FAM27E5:2