Transcript: CHODL-AS1:2

Basic information

LNCipedia transcript ID: CHODL-AS1:2 
LNCipedia gene ID: CHODL-AS1
RefSeq ID: NR_024354
Location (hg38): chr21:17835672-17885608
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024354; NR_024354.1
Alternative gene names: ; CHODL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.9833 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CHODL-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf91-2:2
4.0 CHODL-AS1:2
4.1 CHODL-AS1:2
5.0 CHODL-AS1:2
5.1 CHODL-AS1:2
5.2 CHODL-AS1:2