Transcript: CELF2-AS1:2

Basic information

LNCipedia transcript ID: CELF2-AS1:2 
HGNC Gene Symbol: CELF2-AS1    
HGNC Full Gene Name: CELF2 antisense RNA 1
Ensembl Gene ID: ENSG00000181800
Ensembl Transcript ID: ENST00000379256
Location (hg38): chr10:11316834-11319884
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2468 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000379256.3
Alternative gene names: ENSG00000181800.5; CELF2-AS1; FLJ40494; Em:AC026887.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VSMEIFSVK 92.3076923076923% antisense-3
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.0272 non-coding 
CPAT coding probability 55.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CELF2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-12:1
4.0 CELF2-AS1:2
4.1 CELF2-AS1:2
5.0 CELF2-AS1:2
5.1 CELF2-AS1:2
5.2 CELF2-AS1:2