Transcript: CELF2-AS1:1

Basic information

LNCipedia transcript ID: CELF2-AS1:1 
LNCipedia gene ID: CELF2-AS1
RefSeq ID: NR_126062
Location (hg38): chr10:11316833-11344674
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2573 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126062; NR_126062.1
Alternative gene names: FLJ40494; Em:AC026887.2; CELF2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VSMEIFSVK 92.3076923076923% antisense-1
Lee translation initiation sites non-coding 
PhyloCSF score -103.0272 non-coding 
CPAT coding probability 37.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CELF2-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-12:2
4.0 CELF2-AS1:1
4.1 CELF2-AS1:1
5.0 CELF2-AS1:1
5.1 CELF2-AS1:1
5.2 CELF2-AS1:1