Transcript: CCDC183-AS1:2

Basic information

LNCipedia transcript ID: CCDC183-AS1:2 
LNCipedia gene ID: CCDC183-AS1
Location (hg38): chr9:136800309-136807206
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6142 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT135603
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.0339 coding 
CPAT coding probability 77.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CCDC183-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCN15-1:2
4.0 CCDC183-AS1:2
4.1 CCDC183-AS1:2
5.0 CCDC183-AS1:2
5.1 CCDC183-AS1:2
5.2 CCDC183-AS1:2