Transcript: BAALC-AS2:2

Basic information

LNCipedia transcript ID: BAALC-AS2:2 
HGNC Gene Symbol: BAALC-AS2    
HGNC Full Gene Name: BAALC antisense RNA 2
Ensembl Gene ID: ENSG00000236939
Ensembl Transcript ID: ENST00000436771
RefSeq ID: NR_027071
Location (hg38): chr8:103132963-103141342
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 496 bp
Exons: 2
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027071; ENST00000436771.1; NR_027071.1
Alternative gene names: ENSG00000236939.2; BAALC-AS2; MGC39526


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.919 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS2:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf56-4:1
4.0 BAALC-AS2:2
4.1 BAALC-AS2:2
5.0 BAALC-AS2:2
5.1 BAALC-AS2:2
5.2 BAALC-AS2:2