Transcript: LINC02240:19

Basic information

LNCipedia transcript ID: LINC02240:19 
LNCipedia gene ID: LINC02240
Location (hg38): chr5:124962934-124982216
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2284 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010079; NONHSAT103546
Alternative gene names: XLOC_004536; linc-GRAMD3-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.2423 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02240:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-43D2.2.1-5:2
3.1 lnc-RP11-43D2.2.1-10:2
4.0 lnc-RP11-43D2.2.1-10:2
4.1 lnc-RP11-43D2.2.1-10:2
5.0 lnc-RP11-43D2.2.1-10:2
5.1 LINC02240:8
5.2 LINC02240:19