Transcript: lnc-ADAMTS15-1:9

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-1:9 
LNCipedia gene ID: lnc-ADAMTS15-1
Location (hg38): chr11:130314993-130393775
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 431 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT025125; ENST00000602376.1
Alternative gene names: ENSG00000175773.8; RP11-121M22.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.7578 non-coding 
CPAT coding probability 6.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-121M22.1.1-1:3
4.0 lnc-RP11-121M22.1.1-1:3
4.1 lnc-RP11-121M22.1.1-1:3
5.0 lnc-RP11-121M22.1.1-1:3
5.1 lnc-JAM3-29:8
5.2 lnc-ADAMTS15-1:9