Transcript: lnc-FRMPD2-3:7

Basic information

LNCipedia transcript ID: lnc-FRMPD2-3:7 
LNCipedia gene ID: lnc-FRMPD2-3
Location (hg38): chr10:48138014-48149202
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1963 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001jgw_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.4559 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRMPD2-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN20C-3:1
4.0 lnc-PTPN20C-3:1
4.1 lnc-PTPN20C-3:1
5.0 lnc-PTPN20C-3:1
5.1 lnc-LRRC18-26:1
5.2 lnc-FRMPD2-3:7