Transcript: lnc-ERAL1-8:4

Basic information

LNCipedia transcript ID: lnc-ERAL1-8:4 
LNCipedia gene ID: lnc-ERAL1-8
Location (hg38): chr17:29012805-29016512
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 287 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025344
Alternative gene names: XLOC_012160; linc-PIPOX-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -434.2604 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERAL1-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIPOX-1:2
3.1 lnc-PIPOX-1:2
4.0 lnc-PIPOX-1:2
4.1 lnc-PIPOX-1:2
5.0 lnc-PIPOX-1:2
5.1 lnc-NSRP1-33:4
5.2 lnc-ERAL1-8:4