Transcript: lnc-LYPD5-2:1

Basic information

LNCipedia transcript ID: lnc-LYPD5-2:1 
LNCipedia gene ID: lnc-LYPD5-2
Ensembl Gene ID: ENSG00000268601
Ensembl Transcript ID: ENST00000595680
Location (hg38): chr19:43794309-43795658
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 556 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066628; ENST00000595680.1
Alternative gene names: ENSG00000268601.1; AC115522.3; AC115522.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.9583 non-coding 
CPAT coding probability 14.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYPD5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYPD5-2:1
4.0 lnc-LYPD5-2:1
4.1 lnc-LYPD5-2:1
5.0 lnc-LYPD5-2:1
5.1 lnc-GPR4-44:1
5.2 lnc-LYPD5-2:1