Transcript: LINC00559:8

Basic information

LNCipedia transcript ID: LINC00559:8 
LNCipedia gene ID: LINC00559
RefSeq ID: NR_047489
Location (hg38): chr13:90060247-90119717
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3865 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034642; NR_047489; NR_047489.1
Alternative gene names: LINC00559


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.7069 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00559:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCT-10:2
4.0 lnc-DCT-10:2
4.1 lnc-DCT-10:2
5.0 lnc-DCT-10:2
5.1 LINC00559:4
5.2 LINC00559:8