Transcript: lnc-GPATCH2L-1:2

Basic information

LNCipedia transcript ID: lnc-GPATCH2L-1:2 
LNCipedia gene ID: lnc-GPATCH2L-1
Location (hg38): chr14:76234852-76263467
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 754 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT037900
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.0599 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPATCH2L-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf118-1:10
4.0 lnc-C14orf118-1:10
4.1 lnc-C14orf118-1:10
5.0 lnc-C14orf118-1:10
5.1 lnc-BATF-17:3
5.2 lnc-GPATCH2L-1:2