Transcript: LINC02549:5

Basic information

LNCipedia transcript ID: LINC02549:5 
LNCipedia gene ID: LINC02549
RefSeq ID: NR_125854
Location (hg38): chr6:68226970-68329899
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 676 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125854; NR_125854.1
Alternative gene names: LOC101928280


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.6354 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02549:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL713998.1-1:2
4.0 lnc-AL713998.1-1:2
4.1 lnc-AL713998.1-1:2
5.0 lnc-AL713998.1-1:2
5.1 LINC02549:3
5.2 LINC02549:5