Transcript: EXOC3-AS1:1

Basic information

LNCipedia transcript ID: EXOC3-AS1:1 
LNCipedia gene ID: EXOC3-AS1
Location (hg38): chr5:441836-443160
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1325 bp
Exons: 1
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126522
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.2098 non-coding 
CPAT coding probability 30.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EXOC3-AS1:1 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf55-4:1
4.0 EXOC3-AS1:1
4.1 EXOC3-AS1:1
5.0 EXOC3-AS1:1
5.1 EXOC3-AS1:1
5.2 EXOC3-AS1:1